Sequence Similarity Clusters for the Entities in PDB 1PYH

Entity #1 | Chains: A
Reaction center protein L chain protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
Reaction center protein M chain protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
Reaction center protein H chain protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: 1,3,5,7,D,F,H,J,L,N,P,R,T,V,X,Z
Light-harvesting protein B-800/850, alpha chain protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #5 | Chains: 2,4,6,8,E,G,I,K,M,O,Q,S,U,W,Y
Light-harvesting protein B-800/850, beta chain protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.