Sequence Similarity Clusters for the Entities in PDB 1PYB

Entity #1 | Chains: A,B,C,D
methionyl-tRNA synthetase beta subunit protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23709
95 % 1 1 20294 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.2
PDBFlex
90 % 1 1 19737
70 % 1 1 18119
50 % 2 2 12182
40 % 8 8 3061
30 % 9 9 2720

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.