Sequence Similarity Clusters for the Entities in PDB 1PYB

Entity #1 | Chains: A,B,C,D
methionyl-tRNA synthetase beta subunit protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24642
95 % 1 1 21019 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.2
PDBFlex
90 % 1 1 20418
70 % 1 1 18743
50 % 2 2 12584
40 % 8 8 3167
30 % 9 9 2809

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures