Sequence Similarity Clusters for the Entities in PDB 1PYA

Entity #1 | Chains: A,C,E
PYRUVOYL-DEPENDENT HISTIDINE DECARBOXYLASE (L-HISTIDINE CARBOXYLASE) protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15712
95 % 1 6 3751 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 1 6 3792
70 % 1 6 3740
50 % 1 6 3650
40 % 1 6 3513
30 % 1 6 3287
Entity #2 | Chains: B,D,F
PYRUVOYL-DEPENDENT HISTIDINE DECARBOXYLASE (L-HISTIDINE CARBOXYLASE) protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 2943
95 % 1 6 3675 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 1 6 3725
70 % 1 6 3665
50 % 1 6 3582
40 % 1 6 3453
30 % 1 6 3216

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.