Sequence Similarity Clusters for the Entities in PDB 1PXX

Entity #1 | Chains: A,B,C,D
Prostaglandin G/H synthase 2 protein, length: 604 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 17 587
95 % 42 44 297 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 42 44 308
70 % 49 51 311
50 % 76 82 234
40 % 76 82 254
30 % 76 82 261

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures