Sequence Similarity Clusters for the Entities in PDB 1PXV

Entity #1 | Chains: A,B
cysteine protease protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43316
95 % 1 2 19300 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 2 18792
70 % 1 2 17367
50 % 1 2 15071
40 % 2 3 10986
30 % 2 3 9545
Entity #2 | Chains: C,D
cysteine protease Inhibitor protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 14182
95 % 3 4 9992 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 3 4 9872
70 % 3 4 9389
50 % 3 4 8495
40 % 3 4 7788
30 % 3 4 6865

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures