Sequence Similarity Clusters for the Entities in PDB 1PXV

Entity #1 | Chains: A,B
cysteine protease protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43957
95 % 1 2 19618 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 2 19094
70 % 1 2 17632
50 % 1 2 15289
40 % 2 3 11138
30 % 2 3 9678
Entity #2 | Chains: C,D
cysteine protease Inhibitor protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 14450
95 % 3 4 10178 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 3 4 10054
70 % 3 4 9548
50 % 3 4 8632
40 % 3 4 7909
30 % 3 4 6968

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures