Sequence Similarity Clusters for the Entities in PDB 1PXV

Entity #1 | Chains: A,B
cysteine protease protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42603
95 % 1 2 18973 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 2 18489
70 % 1 2 17099
50 % 1 2 14842
40 % 2 3 10820
30 % 2 3 9402
Entity #2 | Chains: C,D
cysteine protease Inhibitor protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 13938
95 % 3 4 9852 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 3 4 9734
70 % 3 4 9257
50 % 3 4 8374
40 % 3 4 7678
30 % 3 4 6771

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.