Sequence Similarity Clusters for the Entities in PDB 1PXV

Entity #1 | Chains: A,B
cysteine protease protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35904
95 % 1 2 18213 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 2 17751
70 % 1 2 16422
50 % 1 2 14345
40 % 2 3 10517
30 % 2 3 8965
Entity #2 | Chains: C,D
cysteine protease Inhibitor protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 10756
95 % 3 4 10435 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 3 4 10287
70 % 3 4 9746
50 % 3 4 8798
40 % 3 4 7996
30 % 3 4 6927

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures