Sequence Similarity Clusters for the Entities in PDB 1PXV

Entity #1 | Chains: A,B
cysteine protease protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41490
95 % 1 2 18436 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 2 17962
70 % 1 2 16630
50 % 1 2 14462
40 % 2 3 10529
30 % 2 3 9139
Entity #2 | Chains: C,D
cysteine protease Inhibitor protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 13550
95 % 3 4 9600 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 3 4 9494
70 % 3 4 9025
50 % 3 4 8167
40 % 3 4 7492
30 % 3 4 6610

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.