Sequence Similarity Clusters for the Entities in PDB 1PXS

Entity #1 | Chains: A,B
Bacteriorhodopsin protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38332
95 % 62 120 238 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.8
PDBFlex
90 % 63 121 252
70 % 63 121 283
50 % 67 136 257
40 % 67 136 273
30 % 94 194 173

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.