Sequence Similarity Clusters for the Entities in PDB 1PWW

Entity #1 | Chains: A,B
Lethal factor protein, length: 776 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 8 4241
95 % 6 8 4572 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.0
PDBFlex
90 % 6 8 4615
70 % 6 8 4495
50 % 6 8 4313
40 % 6 8 4074
30 % 6 8 3698
Entity #2 | Chains: C,D
LF20 protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 19346
95 % 2 2 17648
90 % 2 2 17219
70 % 2 2 15949
50 % 2 2 13959
40 % 2 2 12478
30 % 2 2 10515

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures