Sequence Similarity Clusters for the Entities in PDB 1PWW

Entity #1 | Chains: A,B
Lethal factor protein, length: 776 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16018
95 % 6 8 4212 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.1
PDBFlex
90 % 6 8 4240
70 % 6 8 4166
50 % 6 8 4011
40 % 6 8 3835
30 % 6 8 3551
Entity #2 | Chains: C,D
LF20 protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24248
95 % 2 2 20684
90 % 2 2 20109
70 % 2 2 18517
50 % 2 2 16116
40 % 2 2 14403
30 % 2 2 12352

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.