Sequence Similarity Clusters for the Entities in PDB 1PWW

Entity #1 | Chains: A,B
Lethal factor protein, length: 776 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16480
95 % 6 8 4318 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.0
PDBFlex
90 % 6 8 4348
70 % 6 8 4268
50 % 6 8 4098
40 % 6 8 3925
30 % 6 8 3640
Entity #2 | Chains: C,D
LF20 protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24930
95 % 2 2 21278
90 % 2 2 20678
70 % 2 2 18987
50 % 2 2 16503
40 % 2 2 14734
30 % 2 2 12639

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures