Sequence Similarity Clusters for the Entities in PDB 1PWV

Entity #1 | Chains: A,B
Lethal factor protein, length: 776 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 5514
95 % 5 8 4250 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.0
PDBFlex
90 % 5 8 4277
70 % 5 8 4209
50 % 5 8 4050
40 % 5 8 3879
30 % 5 8 3597
Entity #2 | Chains: C,D
LF20 protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 24638
95 % 1 2 21042
90 % 1 2 20451
70 % 1 2 18779
50 % 1 2 16333
40 % 1 2 14589
30 % 1 2 12512

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.