Sequence Similarity Clusters for the Entities in PDB 1PWD

Entity #1 | Chains: A
D-alanyl-D-alanine carboxypeptidase precursor protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 15 3643
95 % 9 15 4422 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 9 15 4449
70 % 9 15 4366
50 % 9 15 4203
40 % 9 15 4017
30 % 9 16 3487

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures