Sequence Similarity Clusters for the Entities in PDB 1PWB

Entity #1 | Chains: A,B,C
Pulmonary surfactant-associated protein D protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 2310
95 % 1 7 2951 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 1 7 2999
70 % 1 7 2971
50 % 1 7 2929
40 % 1 8 2762
30 % 1 65 274

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.