Sequence Similarity Clusters for the Entities in PDB 1PWB

Entity #1 | Chains: A,B,C
Pulmonary surfactant-associated protein D protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 2384
95 % 1 7 3032 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 1 7 3079
70 % 1 7 3051
50 % 1 7 3004
40 % 1 8 2824
30 % 1 65 279

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures