Sequence Similarity Clusters for the Entities in PDB 1PWB

Entity #1 | Chains: A,B,C
Pulmonary surfactant-associated protein D protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 2408
95 % 1 7 3069 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 1 7 3114
70 % 1 7 3079
50 % 1 7 3035
40 % 1 8 2857
30 % 1 65 282

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures