Sequence Similarity Clusters for the Entities in PDB 1PW9

Entity #1 | Chains: A,B,C
Pulmonary surfactant-associated protein D protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 2332
95 % 4 7 2971 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 4 7 3020
70 % 4 7 2994
50 % 4 7 2947
40 % 4 8 2779
30 % 5 65 274

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures