Sequence Similarity Clusters for the Entities in PDB 1PW8

Entity #1 | Chains: A
D-alanyl-D-alanine carboxypeptidase protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 15 3680
95 % 11 15 4467 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 11 15 4495
70 % 11 15 4412
50 % 11 15 4241
40 % 11 15 4053
30 % 11 16 3518

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures