Sequence Similarity Clusters for the Entities in PDB 1PW5

Entity #1 | Chains: A
nagD protein, putative protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59288
95 % 2 2 29889 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 3.0
PDBFlex
90 % 2 2 28833
70 % 2 2 25995
50 % 2 2 22249
40 % 13 13 2796
30 % 28 28 1220

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures