Sequence Similarity Clusters for the Entities in PDB 1PVW

Entity #1 | Chains: A,B,C
3,4-dihydroxy-2-butanone 4-phosphate synthase protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 27458
95 % 3 3 10464 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 3 3 10334
70 % 3 3 9820
50 % 3 3 8903
40 % 3 3 8145
30 % 27 29 1132

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.