Sequence Similarity Clusters for the Entities in PDB 1PVH

Entity #1 | Chains: A,C
Interleukin-6 receptor beta chain protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21234
95 % 2 2 18464 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.1
PDBFlex
90 % 2 2 18026
70 % 2 2 16653
50 % 2 2 14480
40 % 2 2 12911
30 % 2 2 11062
Entity #2 | Chains: B,D
Leukemia inhibitory factor protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21982
95 % 1 3 14553 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 1 3 14279
70 % 2 5 9913
50 % 2 5 8985
40 % 2 5 8222
30 % 2 5 7246

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.