Sequence Similarity Clusters for the Entities in PDB 1PVF

Entity #1 | Chains: A,B
Isopentenyl-diphosphate delta-isomerase protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 15 1745
95 % 4 18 1729 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 4 18 1772
70 % 5 19 1711
50 % 5 19 1748
40 % 5 19 1743
30 % 5 19 1705

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures