Sequence Similarity Clusters for the Entities in PDB 1PVD

Entity #1 | Chains: A,B
PYRUVATE DECARBOXYLASE protein, length: 555 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 17506
95 % 4 6 3517 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.9
PDBFlex
90 % 4 6 3583
70 % 6 8 2389
50 % 6 8 2365
40 % 6 8 2340
30 % 15 22 546

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures