Sequence Similarity Clusters for the Entities in PDB 1PVD

Entity #1 | Chains: A,B
PYRUVATE DECARBOXYLASE protein, length: 555 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 17244
95 % 4 6 3482 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.9
PDBFlex
90 % 4 6 3538
70 % 6 8 2349
50 % 6 8 2328
40 % 6 8 2315
30 % 15 21 555

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures