Sequence Similarity Clusters for the Entities in PDB 1PVC

Entity #1 | Chains: 0
POLIOVIRUS TYPE 3, SABIN STRAIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: 1
POLIOVIRUS TYPE 3, SABIN STRAIN protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 11431
95 % 1 7 9653
90 % 1 7 9550
70 % 1 34 1557
50 % 4 40 1355
40 % 9 148 277
30 % 9 148 280
Entity #3 | Chains: 2
POLIOVIRUS TYPE 3, SABIN STRAIN protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9686
95 % 1 7 9700
90 % 1 7 9595
70 % 4 46 1123
50 % 8 150 293
40 % 8 150 312
30 % 12 178 168
Entity #4 | Chains: 3
POLIOVIRUS TYPE 3, SABIN STRAIN protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9759
95 % 1 7 9767
90 % 1 7 9657
70 % 4 46 1125
50 % 5 114 427
40 % 9 159 258
30 % 13 189 151
Entity #5 | Chains: 4
POLIOVIRUS TYPE 3, SABIN STRAIN protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 10185
95 % 1 7 10174
90 % 1 31 1734
70 % 4 82 561
50 % 7 116 422
40 % 7 116 459
30 % 7 116 451

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.