Sequence Similarity Clusters for the Entities in PDB 1PVC

Entity #1 | Chains: 0
POLIOVIRUS TYPE 3, SABIN STRAIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: 1
POLIOVIRUS TYPE 3, SABIN STRAIN protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 11542
95 % 1 7 9744
90 % 1 7 9632
70 % 1 34 1563
50 % 4 40 1362
40 % 9 148 281
30 % 9 148 285
Entity #3 | Chains: 2
POLIOVIRUS TYPE 3, SABIN STRAIN protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9766
95 % 1 7 9791
90 % 1 7 9679
70 % 4 46 1128
50 % 8 150 299
40 % 8 150 316
30 % 12 178 170
Entity #4 | Chains: 3
POLIOVIRUS TYPE 3, SABIN STRAIN protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9839
95 % 1 7 9857
90 % 1 7 9740
70 % 4 46 1130
50 % 5 114 432
40 % 9 159 262
30 % 13 189 152
Entity #5 | Chains: 4
POLIOVIRUS TYPE 3, SABIN STRAIN protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 10270
95 % 1 7 10269
90 % 1 31 1759
70 % 4 82 571
50 % 7 116 429
40 % 7 116 467
30 % 7 116 457

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.