Sequence Similarity Clusters for the Entities in PDB 1PVC

Entity #1 | Chains: 0
POLIOVIRUS TYPE 3, SABIN STRAIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: 1
POLIOVIRUS TYPE 3, SABIN STRAIN protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 11759
95 % 1 7 9909 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 7 9799
70 % 1 34 1577
50 % 4 40 1380
40 % 9 149 283
30 % 9 149 289
Entity #3 | Chains: 2
POLIOVIRUS TYPE 3, SABIN STRAIN protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 9941
95 % 1 7 9958 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 7 9847
70 % 4 46 1143
50 % 8 151 305
40 % 8 151 317
30 % 13 186 166
Entity #4 | Chains: 3
POLIOVIRUS TYPE 3, SABIN STRAIN protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 10014
95 % 1 7 10025 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 1 7 9908
70 % 4 46 1145
50 % 9 158 249
40 % 9 160 264
30 % 14 197 151
Entity #5 | Chains: 4
POLIOVIRUS TYPE 3, SABIN STRAIN protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 10453
95 % 1 7 10444 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 31 1779
70 % 4 82 588
50 % 7 117 432
40 % 7 118 460
30 % 7 118 457

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.