Sequence Similarity Clusters for the Entities in PDB 1PV4

Entity #1 | Chains: G,H,J,K,L
5'-D(P*CP*C)-3' dna, length: 2 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B,C,D,E,F
Transcription termination factor rho protein, length: 419 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 10 581
95 % 5 10 794
90 % 5 10 830
70 % 5 10 872
50 % 6 11 885
40 % 6 11 906
30 % 6 11 897

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.