Sequence Similarity Clusters for the Entities in PDB 1PV1

Entity #1 | Chains: A,B,C,D
Hypothetical 33.9 kDa esterase in SMC3-MRPL8 intergenic region protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 6618
95 % 4 4 6762 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 4 4 6751
70 % 4 4 6550
50 % 4 4 6103
40 % 10 10 2250
30 % 10 10 2114

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures