Sequence Similarity Clusters for the Entities in PDB 1PV1

Entity #1 | Chains: A,B,C,D
Hypothetical 33.9 kDa esterase in SMC3-MRPL8 intergenic region protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19540
95 % 4 4 6365 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 4 4 6349
70 % 4 4 6198
50 % 4 4 5799
40 % 10 10 2116
30 % 10 10 2031

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures