Sequence Similarity Clusters for the Entities in PDB 1PV1

Entity #1 | Chains: A,B,C,D
Hypothetical 33.9 kDa esterase in SMC3-MRPL8 intergenic region protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 18959
95 % 4 4 6185 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 4 4 6168
70 % 4 4 6018
50 % 4 4 5632
40 % 10 10 2057
30 % 10 10 1984

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.