Sequence Similarity Clusters for the Entities in PDB 1PV1

Entity #1 | Chains: A,B,C,D
Hypothetical 33.9 kDa esterase in SMC3-MRPL8 intergenic region protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 6981
95 % 4 4 7115 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 4 4 7077
70 % 4 4 6850
50 % 4 4 6354
40 % 10 10 2345
30 % 10 10 2203

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures