Sequence Similarity Clusters for the Entities in PDB 1PUU

Entity #1 | Chains: A
lectin I A chain protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 38615
95 % 4 5 14265 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 9 12 5739
70 % 9 17 3733
50 % 9 17 3634
40 % 48 77 632
30 % 173 208 215
Entity #2 | Chains: B
lectin I B chain protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57633
95 % 9 12 5699 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 9 17 3788
70 % 9 17 3730
50 % 10 25 2201
40 % 26 47 1169
30 % 26 47 1151

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.