Sequence Similarity Clusters for the Entities in PDB 1PUU

Entity #1 | Chains: A
lectin I A chain protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 13872
95 % 4 6 13084 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 9 13 5473
70 % 9 18 3659
50 % 9 18 3581
40 % 136 170 283
30 % 175 212 229
Entity #2 | Chains: B
lectin I B chain protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53290
95 % 9 13 5440 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 9 18 3716
70 % 9 18 3762
50 % 10 26 2268
40 % 26 48 1197
30 % 26 48 1184

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures