Sequence Similarity Clusters for the Entities in PDB 1PUM

Entity #1 | Chains: A
lectin I A chain protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55108
95 % 5 5 13370
90 % 10 12 5335
70 % 10 17 3517
50 % 10 17 3434
40 % 59 77 590
30 % 186 207 204
Entity #2 | Chains: B
lectin I B chain protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 35738
95 % 10 12 5293
90 % 10 17 3565
70 % 10 17 3514
50 % 14 25 2070
40 % 32 47 1109
30 % 32 47 1090

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.