Sequence Similarity Clusters for the Entities in PDB 1PUM

Entity #1 | Chains: A
lectin I A chain protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53748
95 % 5 5 13057
90 % 10 12 5207
70 % 10 17 3423
50 % 10 17 3351
40 % 59 77 564
30 % 185 206 197
Entity #2 | Chains: B
lectin I B chain protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 34799
95 % 10 12 5158
90 % 10 17 3472
70 % 10 17 3420
50 % 14 25 2015
40 % 32 47 1077
30 % 32 47 1065

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.