Sequence Similarity Clusters for the Entities in PDB 1PUG

Entity #1 | Chains: A,B,C,D
Hypothetical UPF0133 protein ybaB protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23734
95 % 1 1 20310 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.5
PDBFlex
90 % 1 1 19751
70 % 2 2 13694
50 % 2 2 12161
40 % 2 2 11031
30 % 2 2 9578

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.