Sequence Similarity Clusters for the Entities in PDB 1PUD

Entity #1 | Chains: A
TRNA-GUANINE TRANSGLYCOSYLASE protein, length: 386 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 77 100 282
95 % 103 134 267 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 103 134 278
70 % 103 134 322
50 % 103 134 388
40 % 103 135 405
30 % 103 135 407

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures