Sequence Similarity Clusters for the Entities in PDB 1PUD

Entity #1 | Chains: A
TRNA-GUANINE TRANSGLYCOSYLASE protein, length: 386 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 68 86 304
95 % 99 130 265 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 99 130 279
70 % 99 130 318
50 % 99 130 382
40 % 99 131 384
30 % 99 131 387

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures