Sequence Similarity Clusters for the Entities in PDB 1PUB

Entity #1 | Chains: A
GM2-activator protein protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 23254
95 % 8 8 3727
90 % 8 8 3788
70 % 8 9 3465
50 % 8 9 3382
40 % 8 9 3278
30 % 8 9 3077

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures