Sequence Similarity Clusters for the Entities in PDB 1PU5

Entity #1 | Chains: A,B,C
Ganglioside GM2 activator protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 5144
95 % 2 8 3519 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.2
PDBFlex
90 % 2 8 3569
70 % 2 9 3259
50 % 2 9 3185
40 % 2 9 3102
30 % 2 9 2910

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.