Sequence Similarity Clusters for the Entities in PDB 1PTW

Entity #1 | Chains: A,B,C,D
cAMP-specific phosphodiesterase PDE4D2 protein, length: 360 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 27 32 260
95 % 32 40 260 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.5
PDBFlex
90 % 32 40 273
70 % 64 79 177
50 % 64 79 216
40 % 64 79 237
30 % 198 255 71

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.