Sequence Similarity Clusters for the Entities in PDB 1PTS

Entity #1 | Chains: A,B
STREPTAVIDIN protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 84 95 111
95 % 122 142 68
90 % 125 145 72
70 % 125 145 82
50 % 126 146 107
40 % 126 146 132
30 % 154 199 78
Entity #2 | Chains: P
PEPTIDE (FSHPQNT) protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.