Sequence Similarity Clusters for the Entities in PDB 1PTS

Entity #1 | Chains: A,B
STREPTAVIDIN protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 85 96 121
95 % 124 144 73 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 127 147 73
70 % 127 147 92
50 % 128 148 118
40 % 128 148 142
30 % 157 203 100
Entity #2 | Chains: P
PEPTIDE (FSHPQNT) protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures