Sequence Similarity Clusters for the Entities in PDB 1PTS

Entity #1 | Chains: A,B
STREPTAVIDIN protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 85 96 113
95 % 124 144 68
90 % 127 147 71
70 % 127 147 83
50 % 128 148 109
40 % 128 148 133
30 % 156 202 83
Entity #2 | Chains: P
PEPTIDE (FSHPQNT) protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.