Sequence Similarity Clusters for the Entities in PDB 1PTM

Entity #1 | Chains: A,B
4-hydroxythreonine-4-phosphate dehydrogenase protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 8558
95 % 1 3 8903 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 1 4 6905
70 % 2 5 6227
50 % 3 6 4836
40 % 3 6 4577
30 % 5 9 3117

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures