Sequence Similarity Clusters for the Entities in PDB 1PTJ

Entity #1 | Chains: A,B
NAD(P) transhydrogenase subunit alpha part 1 protein, length: 381 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 11 1099
95 % 10 15 1198
90 % 10 15 1221
70 % 10 15 1250
50 % 11 16 1224
40 % 19 26 820
30 % 30 38 496
Entity #2 | Chains: C
NAD(P) transhydrogenase subunit beta protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 5902
95 % 5 6 6467
90 % 5 6 6456
70 % 5 6 6285
50 % 8 10 3870
40 % 8 10 3704
30 % 8 10 3430

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.