Sequence Similarity Clusters for the Entities in PDB 1PTH

Entity #1 | Chains: A,B
PROSTAGLANDIN H2 SYNTHASE-1 protein, length: 576 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 26 882
95 % 22 31 1002 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 22 31 1027
70 % 22 31 1056
50 % 70 82 226
40 % 70 82 246
30 % 70 82 255

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.