Sequence Similarity Clusters for the Entities in PDB 1PTF

Entity #1 | Chains: A
HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN HPR protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 23934
95 % 1 3 20437 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 3 19865
70 % 1 3 18243
50 % 1 33 952
40 % 3 52 685
30 % 3 55 648

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.