Sequence Similarity Clusters for the Entities in PDB 1PT8

Entity #1 | Chains: A,B
Hypothetical protein yfdW protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14541
95 % 5 6 7930 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 5 6 7866
70 % 5 6 7628
50 % 16 22 1437
40 % 16 22 1415
30 % 18 24 1250

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1Q7E 1 A Hypothetical protein yfdW 562 2.8.3.16 | Details
2 1PT7 1 A, B Hypothetical protein yfdW 623 2.8.3.16 | Details
3 2VJQ 1 A, B, C, D FORMYL-COENZYME A TRANSFERASE 847 2.8.3.16 | Details
4 2VJM 1 A FORMYL-COENZYME A TRANSFERASE 847 2.8.3.16 | Details
5 2VJM 2 B FORMYL-COENZYME A TRANSFERASE 847 2.8.3.16 | Details
6 2VJP 1 A, B FORMYL-COENZYME A TRANSFERASE 847 2.8.3.16 | Details
7 1Q6Y 1 A Hypothetical protein yfdW 562 2.8.3.16 | Details
8 1PT5 1 A, B Hypothetical protein yfdW 623 2.8.3.16 | Details
9 4ED9 1 A CAIB/BAIF family protein 29461
10 2VJK 1 A, B FORMYL-COENZYME A TRANSFERASE 847 2.8.3.16 | Details
11 2VJN 1 A, B FORMYL-COENZYME A TRANSFERASE 847 2.8.3.16 | Details
12 3UBM 1 A, B, C, D Formyl-CoA:oxalate CoA-transferase 435 2.8.3 | Details
13 2VJL 1 A, B FORMYL-COENZYME A TRANSFERASE 847 2.8.3.16 | Details
14 1VGQ 1 A, B Formyl-coenzyme A transferase 847 2.8.3.16 | Details
15 1VGR 1 A, B Formyl-coenzyme A transferase 847 2.8.3.16 | Details
16 1P5H 1 A, B Formyl-coenzyme A transferase 847 2.8.3.16 | Details
17 4HL6 1 A, B, C, D, E, F Uncharacterized protein YfdE 562
18 1PT8 1 A, B Hypothetical protein yfdW 623 2.8.3.16 | Details
19 1T3Z 1 A, B Formyl-coenzyme A transferase 847 2.8.3.16 | Details
20 1PQY 1 A Hypothetical protein yfdW 562 2.8.3.16 | Details
21 2VJO 1 A, B FORMYL-COENZYME A TRANSFERASE 847 2.8.3.16 | Details
22 1P5R 1 A, B Formyl-coenzyme A transferase 847 2.8.3.16 | Details
23 1T4C 1 A Formyl-coenzyme A transferase 847 2.8.3.16 | Details
24 1T4C 2 B Formyl-coenzyme A transferase 847 2.8.3.16 | Details