Sequence Similarity Clusters for the Entities in PDB 1PT8

Entity #1 | Chains: A,B
Hypothetical protein yfdW protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14885
95 % 5 6 8108 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 5 6 8037
70 % 5 6 7794
50 % 16 22 1478
40 % 16 22 1454
30 % 18 24 1275

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1PT7 1 A, B Hypothetical protein yfdW 623 2.8.3.16 | Details
2 1PT5 1 A, B Hypothetical protein yfdW 623 2.8.3.16 | Details
3 1PT8 1 A, B Hypothetical protein yfdW 623 2.8.3.16 | Details