Sequence Similarity Clusters for the Entities in PDB 1PSS

Entity #1 | Chains: L
PHOTOSYNTHETIC REACTION CENTER protein, length: 266 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 63 68 396
95 % 89 96 332
90 % 89 96 359
70 % 89 96 397
50 % 107 125 326
40 % 107 125 347
30 % 107 125 357
Entity #2 | Chains: M
PHOTOSYNTHETIC REACTION CENTER protein, length: 296 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 56 61 457
95 % 89 96 331
90 % 89 96 357
70 % 89 96 395
50 % 107 125 325
40 % 107 125 346
30 % 107 125 356
Entity #3 | Chains: H
PHOTOSYNTHETIC REACTION CENTER protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 88 95 239
95 % 89 96 334
90 % 89 96 360
70 % 89 96 398
50 % 89 96 464
40 % 107 125 348
30 % 107 125 358

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.