Sequence Similarity Clusters for the Entities in PDB 1PSD

Entity #1 | Chains: A,B
D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PHOSPHOGLYCERATE DEHYDROGENASE) protein, length: 409 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 11616
95 % 3 7 3251 Flexibility: Low
Max RMSD: 6.2, Avg RMSD: 2.3
PDBFlex
90 % 3 7 3299
70 % 3 7 3268
50 % 4 8 3002
40 % 4 8 2956
30 % 4 8 2771

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.