Sequence Similarity Clusters for the Entities in PDB 1PSD

Entity #1 | Chains: A,B
D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PHOSPHOGLYCERATE DEHYDROGENASE) protein, length: 409 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 11860
95 % 3 7 3339 Flexibility: Low
Max RMSD: 6.2, Avg RMSD: 2.3
PDBFlex
90 % 3 7 3386
70 % 3 7 3349
50 % 4 8 3070
40 % 4 8 3011
30 % 4 8 2824

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures