Sequence Similarity Clusters for the Entities in PDB 1PSD

Entity #1 | Chains: A,B
D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PHOSPHOGLYCERATE DEHYDROGENASE) protein, length: 409 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 13799
95 % 3 7 3424 Flexibility: Low
Max RMSD: 6.2, Avg RMSD: 2.2
PDBFlex
90 % 3 7 3486
70 % 3 7 3416
50 % 4 8 3140
40 % 4 8 3053
30 % 4 8 2810

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures