Sequence Similarity Clusters for the Entities in PDB 1PRT

Entity #1 | Chains: A,G
PERTUSSIS TOXIN (SUBUNIT S1) protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 12470
95 % 1 3 12054
90 % 1 3 11895
70 % 1 3 11257
50 % 1 3 10074
40 % 1 3 9141
30 % 1 3 7971
Entity #2 | Chains: B,H
PERTUSSIS TOXIN (SUBUNIT S2) protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 12877
95 % 1 4 12364
90 % 1 4 12168
70 % 1 7 5649
50 % 1 7 5318
40 % 1 7 4994
30 % 1 7 4509
Entity #3 | Chains: C,I
PERTUSSIS TOXIN (SUBUNIT S3) protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 12878
95 % 1 3 12365
90 % 1 3 12169
70 % 2 7 5649
50 % 2 7 5318
40 % 2 7 4994
30 % 2 7 4509
Entity #4 | Chains: D,E,J,K
PERTUSSIS TOXIN (SUBUNIT S4) protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 5347
95 % 1 3 5999
90 % 1 3 5990
70 % 1 3 5861
50 % 1 3 5499
40 % 1 3 5160
30 % 1 3 4635
Entity #5 | Chains: F,L
PERTUSSIS TOXIN (SUBUNIT S5) protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 13765
95 % 1 3 13084
90 % 1 3 12875
70 % 1 3 12139
50 % 1 3 10833
40 % 1 3 9829
30 % 1 3 8558

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.