Sequence Similarity Clusters for the Entities in PDB 1PRT

Entity #1 | Chains: A,G
PERTUSSIS TOXIN (SUBUNIT S1) protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 11775
95 % 1 3 11379
90 % 1 3 11227
70 % 1 3 10596
50 % 1 3 9534
40 % 1 3 8646
30 % 1 3 7555
Entity #2 | Chains: B,H
PERTUSSIS TOXIN (SUBUNIT S2) protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 12159
95 % 1 4 11669
90 % 1 4 11489
70 % 1 7 5306
50 % 1 7 5016
40 % 1 7 4732
30 % 1 7 4277
Entity #3 | Chains: C,I
PERTUSSIS TOXIN (SUBUNIT S3) protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 12160
95 % 1 3 11670
90 % 1 3 11490
70 % 2 7 5306
50 % 2 7 5016
40 % 2 7 4732
30 % 2 7 4277
Entity #4 | Chains: D,E,J,K
PERTUSSIS TOXIN (SUBUNIT S4) protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 5000
95 % 1 3 5620
90 % 1 3 5621
70 % 1 3 5509
50 % 1 3 5192
40 % 1 3 4892
30 % 1 3 4398
Entity #5 | Chains: F,L
PERTUSSIS TOXIN (SUBUNIT S5) protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 13016
95 % 1 3 12374
90 % 1 3 12176
70 % 1 3 11437
50 % 1 3 10256
40 % 1 3 9295
30 % 1 3 8109

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.