Sequence Similarity Clusters for the Entities in PDB 1PRG

Entity #1 | Chains: A,B
PROTEIN (PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA) protein, length: 270 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 82 146 108
95 % 92 169 117 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.7
PDBFlex
90 % 92 169 121
70 % 92 169 138
50 % 129 226 107
40 % 129 226 131
30 % 810 1253 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures