Sequence Similarity Clusters for the Entities in PDB 1PQZ

Entity #1 | Chains: A
MCMV M144 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58915
95 % 2 2 29711 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 2 2 28679
70 % 2 2 25866
50 % 2 2 22122
40 % 2 2 19493
30 % 2 2 16541
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 55 135 94
95 % 91 228 60 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.6
PDBFlex
90 % 91 228 65
70 % 499 912 4
50 % 511 934 3
40 % 511 934 7
30 % 511 934 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.