Sequence Similarity Clusters for the Entities in PDB 1PQZ

Entity #1 | Chains: A
MCMV M144 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60144
95 % 2 2 30335 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 2 2 29264
70 % 2 2 26360
50 % 2 2 22531
40 % 2 2 19842
30 % 2 2 16823
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 55 135 97
95 % 91 230 63 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.6
PDBFlex
90 % 91 230 66
70 % 504 924 4
50 % 516 946 3
40 % 516 946 7
30 % 516 946 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures