Sequence Similarity Clusters for the Entities in PDB 1PQZ

Entity #1 | Chains: A
MCMV M144 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60848
95 % 2 2 30695 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 2 2 29601
70 % 2 2 26650
50 % 2 2 22767
40 % 2 2 20045
30 % 2 2 17000
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 55 136 98
95 % 91 234 63 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.6
PDBFlex
90 % 91 234 65
70 % 507 936 4
50 % 519 958 3
40 % 519 958 7
30 % 519 958 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures