Sequence Similarity Clusters for the Entities in PDB 1PQY

Entity #1 | Chains: A
Hypothetical protein yfdW protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 25727
95 % 6 6 7580 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 6 6 7529
70 % 6 6 7333
50 % 18 22 1378
40 % 18 22 1385
30 % 18 22 1363

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures