Sequence Similarity Clusters for the Entities in PDB 1PQF

Entity #1 | Chains: A,B
Aspartate 1-decarboxylase protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 16722
95 % 6 8 5130 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.0
PDBFlex
90 % 6 8 5160
70 % 6 8 5019
50 % 6 8 4776
40 % 6 8 4500
30 % 6 8 4043

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1PQH 1 A, B Aspartate 1-decarboxylase 562 4.1.1.11 | Details 4.1.3.30 | Details
2 4CRZ 1 A ASPARTATE 1-DECARBOXYLASE 562 4.1.1.11 | Details 4.1.3.30 | Details
3 4AZD 1 A, B ASPARTATE 1-DECARBOXYLASE 562 4.1.1.11 | Details 4.1.3.30 | Details
4 1PT1 1 A, B Aspartate 1-decarboxylase 562 4.1.1.11 | Details 4.1.3.30 | Details
5 1PYQ 1 A, B Aspartate 1-decarboxylase 562 4.1.1.11 | Details 4.1.3.30 | Details
6 1PQF 1 A, B Aspartate 1-decarboxylase 562 4.1.1.11 | Details 4.1.3.30 | Details
7 1PT0 1 A, B Aspartate 1-decarboxylase 562 4.1.1.11 | Details 4.1.3.30 | Details
8 4CS0 1 A ASPARTATE 1-DECARBOXYLASE 562 4.1.1.11 | Details 4.1.3.30 | Details