Sequence Similarity Clusters for the Entities in PDB 1PQF

Entity #1 | Chains: A,B
Aspartate 1-decarboxylase protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 15705
95 % 6 8 4811 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.9
PDBFlex
90 % 6 8 4852
70 % 6 8 4725
50 % 6 8 4736
40 % 6 8 4459
30 % 6 8 3856

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1PQH 1 A, B Aspartate 1-decarboxylase 562 4.1.1.11 | Details
2 4CRZ 1 A ASPARTATE 1-DECARBOXYLASE 562 4.1.1.11 | Details
3 4AZD 1 A, B ASPARTATE 1-DECARBOXYLASE 562 4.1.1.11 | Details
4 1PT1 1 A, B Aspartate 1-decarboxylase 562 4.1.1.11 | Details
5 1PYQ 1 A, B Aspartate 1-decarboxylase 562 4.1.1.11 | Details
6 1PQF 1 A, B Aspartate 1-decarboxylase 562 4.1.1.11 | Details
7 1PT0 1 A, B Aspartate 1-decarboxylase 562 4.1.1.11 | Details
8 4CS0 1 A ASPARTATE 1-DECARBOXYLASE 562 4.1.1.11 | Details