Sequence Similarity Clusters for the Entities in PDB 1PQF

Entity #1 | Chains: A,B
Aspartate 1-decarboxylase protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45118
95 % 6 8 4949 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.9
PDBFlex
90 % 6 8 4969
70 % 6 8 4847
50 % 6 8 4646
40 % 6 8 4410
30 % 6 8 4047

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures