Sequence Similarity Clusters for the Entities in PDB 1PQC

Entity #1 | Chains: A,B,C,D
Oxysterols receptor LXR-beta protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 1787
95 % 11 16 1422 Flexibility: Low
Max RMSD: 9.1, Avg RMSD: 2.4
PDBFlex
90 % 11 16 1448
70 % 18 26 977
50 % 18 26 1014
40 % 20 34 875
30 % 849 1019 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures