Sequence Similarity Clusters for the Entities in PDB 1PQ9

Entity #1 | Chains: A,B,C,D
Oxysterols receptor LXR-beta protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 9 1734
95 % 2 16 1379 Flexibility: Low
Max RMSD: 9.1, Avg RMSD: 2.4
PDBFlex
90 % 2 16 1405
70 % 5 26 956
50 % 5 26 998
40 % 5 34 859
30 % 433 1004 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures