Sequence Similarity Clusters for the Entities in PDB 1PQ6

Entity #1 | Chains: A,B,C,D
Oxysterols receptor LXR-beta protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 9 1718
95 % 5 16 1368 Flexibility: Low
Max RMSD: 9.1, Avg RMSD: 2.4
PDBFlex
90 % 5 16 1392
70 % 8 26 948
50 % 8 26 990
40 % 8 34 856
30 % 653 992 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures