Sequence Similarity Clusters for the Entities in PDB 1PQ4

Entity #1 | Chains: A,B
periplasmic binding protein component of an ABC type zinc uptake transporter protein, length: 291 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45319
95 % 1 1 37795 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 36050
70 % 1 3 19621
50 % 1 3 16941
40 % 1 3 14965
30 % 18 51 802

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures