Sequence Similarity Clusters for the Entities in PDB 1PQ4

Entity #1 | Chains: A,B
periplasmic binding protein component of an ABC type zinc uptake transporter protein, length: 291 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36051
95 % 1 1 28187 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 27220
70 % 1 3 15402
50 % 1 3 13492
40 % 1 3 12092
30 % 17 52 669

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.