Sequence Similarity Clusters for the Entities in PDB 1PQ1

Entity #1 | Chains: A
Apoptosis regulator Bcl-X protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 10737
95 % 3 29 1603 Flexibility: Medium
Max RMSD: 22.5, Avg RMSD: 6.4
PDBFlex
90 % 3 29 1636
70 % 3 29 1650
50 % 3 29 1685
40 % 3 31 1497
30 % 3 31 1472
Entity #2 | Chains: B
BCL2-like protein 11 protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75579
95 % 1 1 52626
90 % 1 1 49891
70 % 1 1 43654
50 % 1 1 37215
40 % 1 1 32783
30 % 1 1 27775

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures