Sequence Similarity Clusters for the Entities in PDB 1PQ1

Entity #1 | Chains: A
Apoptosis regulator Bcl-X protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 10940
95 % 3 29 1622 Flexibility: Medium
Max RMSD: 22.5, Avg RMSD: 6.4
PDBFlex
90 % 3 29 1653
70 % 3 29 1673
50 % 3 29 1713
40 % 3 31 1513
30 % 3 31 1494
Entity #2 | Chains: B
BCL2-like protein 11 protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 76520
95 % 1 1 53255
90 % 1 1 50466
70 % 1 1 44145
50 % 1 1 37626
40 % 1 1 33154
30 % 1 1 28093

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures