Sequence Similarity Clusters for the Entities in PDB 1PPW

Entity #1 | Chains: A,B
Isopentenyl-diphosphate delta-isomerase protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 15 1756
95 % 16 18 1751 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 16 18 1790
70 % 17 19 1737
50 % 17 19 1760
40 % 17 19 1755
30 % 17 19 1713

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures