Sequence Similarity Clusters for the Entities in PDB 1PPO

Entity #1 | Chains: A
PROTEASE OMEGA protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 35087
95 % 1 2 30019 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 2 28813
70 % 1 4 18428
50 % 58 198 143
40 % 69 242 125
30 % 73 282 117

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures