Sequence Similarity Clusters for the Entities in PDB 1PPD

Entity #1 | Chains: A
2-HYDROXYETHYL-THIOPAPAIN protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 16 3331
95 % 8 24 2239 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 8 24 2303
70 % 8 24 2297
50 % 76 172 155
40 % 89 212 132
30 % 98 248 126

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.